Public handling: selected full-text prompt with secret filtering.
Prompt Text
Repository: D:\Research\UncertaintyProtein-AI4S. You are not alone in the codebase; do not revert edits made by others, and keep to your ownership. Task: implement only docs/governance updates for the Modern External Baseline + Harness Closure Plan. Owned files: AGENTS.md, README.md, protein_bo_conformal/README.md, protein_bo_conformal/docs/research_engineering_harness.md, protein_bo_conformal/docs/modern_baseline_report.md, protein_bo_conformal/docs/server_runbook_observation_baselines.md, protein_bo_conformal/docs/submission_checklist.md, and optionally protein_bo_conformal/docs/observation_to_method_milestone.md if needed. Do not edit code/tests/configs/protocols/server scripts. Requirements: state first-wave external baseline policy (exactly eight external baseline IDs, internal controls separate), no placeholder server inputs except explicit smoke, observer adjudication before SFT, low-N 16/32/64/128 matrix, reviewer-risk/stopping criteria, and every final report must include next-step plan. Keep docs concise and consistent; remove/replace any 'at least three PLM' threshold language. After edits, final answer must list changed file paths and summarize changes. Do not run mutating formatters.
Reuse Notes
EXTRACTED: This is a selected Codex prompt or automation prompt from the local Codex corpus.
INFERRED: Future agents can reuse its structure, constraints, and acceptance criteria when creating similar Codex workflows.